1. NCBI Taxonomy Homepage Searchable and browsable taxonomy tree of organisms for which there are publicly available gene sequences. http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/

PubMed Entrez BLAST OMIM ... Structure Search for As complete name wild card token set phonetic name taxonomy id lock Taxonomy browser Archaea Bacteria Eukaryota ... Viruses Taxonomy information Taxonomy resources Taxonomic advisors Genetic codes Taxonomy Statistics ... Recent changes to classification The NCBI Taxonomy Homepage Taxonomy Tip of the Day Did you know that BLAST sequence similarity searches can be limited and analyzed by taxonomic criteria? For example, typing 'Bacteria' into the organism field in the Advanced Blast program will limit a BLAST search to only bacterial sequences. In addition, you can view BLAST results sorted by organism and other taxonomic criteria by following the 'Taxonomy reports' link. These are direct links to some of the organisms commonly used in molecular research projects: Arabidopsis thaliana Escherichia coli Pneumocystis carinii Bos taurus ... Zea mays Comments and questions to info@ncbi.nlm.nih.gov Credits: Scott Federhen, Ian Harrison, Carol Hotton, Detlef Leipe, Vladimir Soussov, Richard Sternberg, Sean Turner. [Help] [Search] [NLM NIH]

2. Digital Taxonomy - Introduction An attempt to present a wideranging resource of information for biodiversity data management in the Category Science Biology taxonomy Software Taxonomic Databases......Digital taxonomy. An Information Resource on Biodiversity Data Management. http://www.geocities.com/RainForest/Vines/8695/

Digital Taxonomy An Information Resource on Biodiversity Data Management About Software Data Documents ... Personal Visited times since January 19, 1998 Last updated on November 13, 2002 Mauro J. Cavalcanti Rio de Janeiro, BRASIL Suggestions? Criticisms? Complaints? Drop me a note! This page hosted by Get your own Free Home Page

3. Learning Skills Program - Bloom's Taxonomy Bloom's taxonomy *. Benjamin Bloom created this taxonomy for categorizing levelof abstraction of questions that commonly occur in educational settings. http://www.coun.uvic.ca/learn/program/hndouts/bloom.html

Bloom's Taxonomy Benjamin Bloom created this taxonomy for categorizing level of abstraction of questions that commonly occur in educational settings. The taxonomy provides a useful structure in which to categorize test questions, since professors will characteristically ask questions within particular levels, and if you can determine the levels of questions that will appear on your exams, you will be able to study using appropriate strategies. Competence Skills Demonstrated Knowledge observation and recall of information knowledge of dates, events, places knowledge of major ideas mastery of subject matter Question Cues: list, define, tell, describe, identify, show, label, collect, examine, tabulate, quote, name, who, when, where, etc. Comprehension understanding information grasp meaning translate knowledge into new context interpret facts, compare, contrast order, group, infer causes predict consequences Question Cues: summarize, describe, interpret, contrast, predict, associate, distinguish, estimate, differentiate, discuss, extend Application use information use methods, concepts, theories in new situations

4. Page Lab About taxonomy and systematics at the University of Glasgow, with links to other internet resources on these subjects. http://taxonomy.zoology.gla.ac.uk/

Taxonomy, Systematics, and Bioinformatics at the University of Glasgow Home People Research ... Links News May 2002 Bioinformatics Research Centr e launched at Glasgow February 19th 2002 Iowa State Supertree server November 20th 2001 RadCon 1.1.4 released. November 14th 2001 "Taxonomy at Glasgow" site relauched as "Page Lab" web site. Welcome to the Page lab web site! Our research interests include host-parasite cospeciation, phylogenetic inference, supertrees, genome evolution, RNA secondary structure and evolution, and louse phylogeny. Use the tabs above to browse the site. Some recent highlights MrBayes web form (create "mrbayes" blocks online) Daniel Huson's SplitsTree ported to Mac OS X Modified MinCut Supertrees presentation by Rod Page given at WABI 2002. is available for Mac OS. Page, Roderic D. M., editor Tangled Trees: Phylogeny, Cospeciation, and Coevolution

5. GRIN TAXONOMY HOME PAGE GRIN taxonomy. A recent paper on GRIN taxonomy provides a thorough discussion ofdata standards and taxonomic philosophy. General Queries of GRIN taxonomy http://www.ars-grin.gov/npgs/tax/

GRIN TAXONOMY GRIN taxonomic data provide the structure and nomenclature for the accessions of the National Plant Germplasm System ( NPGS ). Many plants (37,000 taxa, 14,000 genera) are included in GRIN taxonomy, especially economic plants. A recent paper on GRIN taxonomy provides a thorough discussion of data standards and taxonomic philosophy. General Queries of GRIN Taxonomy: Complex queries of species data (using multiple criteria) Simple queries of species data (using a single criterion) Specialized Queries of GRIN Taxonomy: Economic Plants World Economic Plants (USDA Tech. Bull. 1796) Nomenclature of PEAS Database USDA-NRCS Nomenclature of Seed Associations (ISTA, AOSA) Federal (USDA-APHIS) and State Noxious Weeds ... US-FWS Download GRIN Data on Families, Genera, or Species Other taxonomic databases can also be accessed. IPNI : International Plant Names Index ING : Index Nominum Genericorum PLANTS USDA-NRCS Database of North American Plants Flora of North America : Collaborative Floristic Effort of North American Botanists : Nomenclatural and Specimen Database of the Missouri Botanical Garden Search the Internet Directory for Botany Send comments to Dr. J. H. Wiersema at:

6. TAXONOMY taxonomy Classification, Nomenclature, Laboratory Identification. Copyright© 1995 University of Texas Houston Medical School, DPALM http://medic.med.uth.tmc.edu/path/00001458.htm

TAXONOMY Classification, Nomenclature, Laboratory Identification University of Texas - Houston Medical School , DPALM MEDIC

7. UCMP Web Lift To Taxa Access data on the fungi, plantae, chromista, metazoa, and protisa kingdoms. With photos and descriptions of key entries, and scientific names. http://www.ucmp.berkeley.edu/help/taxaform.html

Attention! : If your browser cannot display frames, you will be unable to use the New UCMP Web Lift. However, you can find the same information in the old version of the UCMP Web Lift to Taxa or the Express Lift

8. Taxonomy Lab: An Exercise In Taxonomy, Evolution, And Classification, Interdisci Lab is used in various courses at the university. It seeks to reveal the field's creativity and how classification schemes are derived. http://jrscience.wcp.muohio.edu/lab/TaxonomyLab.html

The "Nuts and Bolts" of Taxonomy and Classification Compiled by R. Hays Cummins, Interdisciplinary Studies Miami University (Sources include Mayr, E. 1969. Principles of Systematic Zoology. McGraw-Hill: New York.) Welcome! It is 12:30 PM on Tuesday, March 18, 2003. This page has served visitors. Last Update: Friday, September 27, 2002. Introduction We use this lab in Patterns and Processes , and Tropical Marine Ecology . This exercise illustrates the creativity involved in taxonomy and the roles form and function, ancestral traits and derived characters play in generating classification schemes. It can also serve as an introduction to topics in evolution and paleontology. We have noticed that in the field, after completing this exercise, students begin to recognize distinctions and similarities in fauna which they may have not noticed before. Terms for Discussion Phylogeny Divergence Convergence Linnaeus Heirarchy Evolutionary Tree Homologous Structure Morphology Function Background It has become apparent to scientists that the biosphere consists of, at a minimum, 1.5 million described species. Some researchers estimate that there may be upwards of 40 million species (Go here for an

9. Agent Or Program Paper on the nature of autonomous agents. Discusses the differences between an agent and an ordinary program. Is it an Agent, or just a Program? A taxonomy for Autonomous Agents http://www.msci.memphis.edu/~franklin/AgentProg.html

Is it an Agent, or just a Program?: A Taxonomy for Autonomous Agents Stan Franklin and Art Graesser Institute for Intelligent Systems University of Memphis Proceedings of the Third International Workshop on Agent Theories, Architectures, and Languages , Springer-Verlag, 1996. Abstract The advent of software agents gave rise to much discussion of just what such an agent is, and of how they differ from programs in general. Here we propose a formal definition of an autonomous agent which clearly distinguishes a software agent from just any program. We also offer the beginnings of a natural kinds taxonomy of autonomous agents, and discuss possibilities for further classification . Finally, we discuss subagents and multiagent systems Introduction On meeting a friend or colleague that we haven't seen for a while, or a new acquaintance, some version of the following conversation often ensues: What are you working on these days? Control structures for autonomous agents. Autonomous agents? What do you mean by that? A brief explanation is then followed by: But agents sound just like computer programs. How are they different?

10. Supernova Taxonomy A discussion of the taxonomy of supernovae. http://rsd-www.nrl.navy.mil/7212/montes/snetax.html

Supernova Taxonomy First published 1996 October 17; last updated 2002 February 12 by Marcos J. Montes A Supernovae Taxonomy Flow Chart Description of the Flow Chart The observational classes are in sharp-cornered boxes. Theoretical interpretations (i.e. possible progenitors ) are listed in the boxes with rounded corners. Examples are listed underneath the observational classes. It should be noted that SN 1987A had a fairly odd behavior (for fairly well understood reasons) and is certainly not a prototypical SN IIP. It was rather sub-luminous, and while it may represent a certain population of sub-luminous SN II, we will probably not detect too many members of this population precisely because they are sub-luminous. SN 1987A may be better classified as an SN IIpec. A theoretical interpretation of observations has driven the organization of this plot. At the left side, there is little or no hydrogen present in the ejecta; as one moves right, there is increasing evidence for hydrogen. SN IIP have a plateau in their post-maximum light curve, while SN IIL do not (Barbon et al 1979). SN IIL and IIP may Current Classification Scheme The current classification scheme has these broad divisions: SN I show no hydrogen lines in their early spectra; SN II do show hydrogen in their early spectra. Subclasses determined by spectral evidence are denoted by lower-case letters, Ia, Ib, Ic, IIb (Woosley et al. 1987; Filippenko 1988), and IIn (Schlegel 1990) . Subclasses determined by certain properties of the (usually)

11. HORTAX - The Horticultural Taxonomy Group Gives the history of HORTAX, an association of taxonomists and horticulturists interested in the classification and nomenclature of cultivated plants, member information and links to the archives of HORTAX News. http://www.hortax.org.uk/

The Horticultural Taxonomy Group Welcome to our Web pages. HORTAX was formed in 1988 as a privately invited association of taxonomists and horticulturists based in the British Isles and having a professional interest in the classification and nomenclature of cultivated plants. Members of HORTAX History and Achievements of HORTAX Symposia on the Taxonomy of Cultivated Plants Archive of HORTAX NEWS Issues ... Related Web Resources Contact us: info@hortax.org.uk for further information on HORTAX, its membership and activities webweaver@hortax.org.uk with any comments and feedback about this Web site The Horticultural Taxonomy Group

12. Vas's M.Phil Chapter 7 Taxonomy Discussions of past classification systems and development of a new one. http://www.gigaflop.demon.co.uk/comp/chapt7.htm

Vas's Parallel Computer Taxonomy Preface to the on-line version This document is chapter 7 of my MPhil thesis. Parallel Computer Taxonomy, Wasel Chemij, MPhil, Aberystwyth University, 1994 It explains various published parallel computer taxonomies, and introduces a new one based on how I saw the field developing. At the moment there are only a few chapters is on line so apologies for any cross references to other chapters. To see the formulae later on in this page your browser should display mathematical symbols correctly. If you see 'N' to the power of 'a half' on the next line N then the formulea are being shown correctly. Home Aberystwyth Heanor Computing ... Topology Taxonomy Flynn Handler Shore Jesshope ... Built 7 Taxonomy 7.1 Flynn's Taxonomy 7.1.1 SISD Machine 7.1.2 SIMD Machine 7.1.3 MISD Machine 7.1.4 MIMD Machine 7.1.5 Extensions to Flynn's Taxonomy 7.2 Handler's Classification 7.3 Shore's Taxonomy 7.3.1 Type-I 7.3.2 Type-II 7.3.3 Type-III 7.3.4 Type-IV 7.3.5 Type-V 7.3.6 Type-VI

13. Image Database Search Searchable taxonomy map from University of British Columbia. http://www.science.ubc.ca/~frst111/cgi-bin/db_gallery/taxamap.html

Welcome to the taxonomy map. You can find your way through the taxonomy of trees by starting with a taxa or common name. A blank entry will start you with the Plant kingdom (Plantae). Search for :

14. African Wildlife - Taxonomy Taxonomic rank of common African animals, some with photographs. http://www.eskimo.com/~rowdenw/EEA/photo/spp/spp-FContents.html

15. Page Lab - Other Software taxonomy, Systematics, and Bioinformatics at the University of Glasgow. Home People Research Data Software Publications Services Teaching Links Category Science Biology taxonomy Software Directories http://taxonomy.zoology.gla.ac.uk/software.html

Taxonomy, Systematics, and Bioinformatics at the University of Glasgow Home People Research Data ... Programming and other documents This is a list of some software we have found useful. A much more extensive list is provided by Joe Felsenstein. Tree viewing TreeView View NEXUS and PHYLIP format tree files on Macs (68K and Power Mac) and Windows (16 and 32 bit). Unix version as well ( TreeView X TreeExplorer View and manipulate MEGA format trees under Windows. Tree building CAFCA C ollection of A PL F unctions for C ladistic A nalysis, written by Rino Zandee . Currently Macintosh only, but Windows version coming. MrBayes MrBayes is a program for Bayesian inference of phylogeny using Markov Chain Monte Carlo methods. Avaialble for Mac, PC, and Unix. PAUP* The standard program for phylogenetic analysis (Mac OS, Windows, Unix). PHYLIP The most comphrehensive, all imbracing collection of phylogenetic programs, including parsimony, maximum likelihood, and distance methods, plus utility programs. Runs on anything. Spectronet Spectronet is a package for the analysis and visualization of complex evolutionary data that is not best represented by a bifurcating tree. Given an alignment in NEXUS format, the package works by computing a collection of weighted splits or bipartitions of the taxa and then allowing the user to interactively analyze the resulting collection using tools such as Lento-plots and median networks (Windows only).

16. Entrez-Taxonomy The NCBI Entrez taxonomy Homepage. The NCBI taxonomy database containsthe names of all organisms that are represented in the genetic http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Taxonomy

17. NCBI Taxonomy Homepage taxonomy resource description. Allow to browse taxonomy tree that containsclassification of organizms. NCBI Front Page, The NCBI taxonomy Homepage. http://www.ncbi.nlm.nih.gov/Taxonomy/

PubMed Entrez BLAST OMIM ... Structure Search for As complete name wild card token set phonetic name taxonomy id lock Taxonomy browser Archaea Bacteria Eukaryota ... Viruses Taxonomy information Taxonomy resources Taxonomic advisors Genetic codes Taxonomy Statistics ... Recent changes to classification The NCBI Taxonomy Homepage Taxonomy Tip of the Day Did you know that BLAST sequence similarity searches can be limited and analyzed by taxonomic criteria? For example, typing 'Bacteria' into the organism field in the Advanced Blast program will limit a BLAST search to only bacterial sequences. In addition, you can view BLAST results sorted by organism and other taxonomic criteria by following the 'Taxonomy reports' link. These are direct links to some of the organisms commonly used in molecular research projects: Arabidopsis thaliana Escherichia coli Pneumocystis carinii Bos taurus ... Zea mays Comments and questions to info@ncbi.nlm.nih.gov Credits: Scott Federhen, Ian Harrison, Carol Hotton, Detlef Leipe, Vladimir Soussov, Richard Sternberg, Sean Turner. [Help] [Search] [NLM NIH]

18. NCBI Taxonomy Homepage taxonomy resource description. Allow to browse taxonomy tree that contains classification of organizms. Consequently, the classification found in the NCBI/GenBank taxonomy database will occasionally change to incorporate new http://www.ncbi.nlm.nih.gov/Taxonomy/tax.html

PubMed Entrez BLAST OMIM ... Structure Search for As complete name wild card token set phonetic name taxonomy id lock Taxonomy browser Archaea Bacteria Eukaryota ... Viruses Taxonomy information Taxonomy resources Taxonomic advisors Genetic codes Taxonomy Statistics ... Recent changes to classification The NCBI Taxonomy Homepage Taxonomy Tip of the Day Did you know that BLAST sequence similarity searches can be limited and analyzed by taxonomic criteria? For example, typing 'Bacteria' into the organism field in the Advanced Blast program will limit a BLAST search to only bacterial sequences. In addition, you can view BLAST results sorted by organism and other taxonomic criteria by following the 'Taxonomy reports' link. These are direct links to some of the organisms commonly used in molecular research projects: Arabidopsis thaliana Escherichia coli Pneumocystis carinii Bos taurus ... Zea mays Comments and questions to info@ncbi.nlm.nih.gov Credits: Scott Federhen, Ian Harrison, Carol Hotton, Detlef Leipe, Vladimir Soussov, Richard Sternberg, Sean Turner. [Help] [Search] [NLM NIH]

19. Natural Perspective Dedicated to the beauty and science of nature and to the joys nature brings to those who explore it. The material here is organized according to the biological principles of taxonomy. http://www.perspective.com/nature/index.html

Page 1 of 38 Natural Perspective (Last modified: 13 May 2000; latest additions to site : 18 May 2000) Plantae Fungi Animalia Protoctista ... Biosphere Monthly Feature: The Plant Kingdom This site is dedicated to the beauty and science of nature and to the joys nature brings to those who explore it. The joy of seeing "familiar faces" everywhere; the invigoration a nature walk brings to both body and soul; the beauty and diversity of our Earthly co-habitants; and the pleasure of eating something found along the way. The material here is organized according to the biological principles of Taxonomy, or classification: We live on a planet called Earth. Biologists call the Earth and its atmosphere the Biosphere . The Biosphere is composed of organic and inorganic matter. Organic matter (stuff containing carbon) is again divided into living and non-living objects. All living beings are currently divided into five Kingdoms. Four of these Kingdoms are depicted above: Plantae , the plant kingdom, studied in the field of Botany Fungi , the kingdom of fungus and molds, studied as Mycology Animalia , the animal kingdom, the domain of Zoology ; and Protoctista , a catch-all for all other "higher-order" organisms from single-celled microbes to large seaweeds (algae). The fifth kingdom

20. DELTA: DEscription Language For TAxonomy A flexible format for encoding taxonomic descriptions for computer processing. It can be used to produce naturallanguage descriptions, keys, classifications, and information-retrieval systems. http://biodiversity.bio.uno.edu/delta/

DELTA The DELTA format (DEscription Language for TAxonomy) is a flexible method for encoding taxonomic descriptions for computer processing. It has been adopted by the International Taxonomic Databases Working Group (TDWG) as a standard for data exchange. DELTA-format data can be used to produce natural-language descriptions, interactive or conventional keys, cladistic or phenetic classifications, and information-retrieval systems. Overview of the DELTA system Programs and documentation Data - descriptions, illustrations, identification, information retrieval Index to DELTA Internet publications that have been cited in hard-copy publications ... Biodiversity and Biological Collections Server

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